WormBase Tree Display for Variation: WBVar00152929

WBVar00152929 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00152929
    Other_name: haw6179
      cewivar00165311
      CE32609:p.Asn30=
      C43E11.2b.3:c.90T>C
      C43E11.2a.1:c.876T>C
      C43E11.2b.1:c.90T>C
      C43E11.2b.2:c.90T>C
      CE08680:p.Asn292=
    HGVSg: CHROMOSOME_I:g.4266657T>C
  Sequence_details: SMap: S_parent: Sequence: C43E11
    Flanking_sequences: atgatgagcagaaaggacgattgaa atggctccgatgaagaatcgagttt
    Mapping_target: C43E11
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01343516
    Status: Live
  Affects: Gene: WBGene00016602
    Transcript: C43E11.2b.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C43E11.2b.2:c.90T>C
        HGVSp: CE32609:p.Asn30=
        cDNA_position: 1255
        CDS_position: 90
        Protein_position: 30
        Exon_number: 2/4
        Codon_change: aaT/aaC
        Amino_acid_change: N
      C43E11.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C43E11.2b.1:c.90T>C
        HGVSp: CE32609:p.Asn30=
        cDNA_position: 1445
        CDS_position: 90
        Protein_position: 30
        Exon_number: 4/6
        Codon_change: aaT/aaC
        Amino_acid_change: N
      C43E11.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C43E11.2a.1:c.876T>C
        HGVSp: CE08680:p.Asn292=
        cDNA_position: 876
        CDS_position: 876
        Protein_position: 292
        Exon_number: 4/6
        Codon_change: aaT/aaC
        Amino_acid_change: N
      C43E11.2b.3 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C43E11.2b.3:c.90T>C
        HGVSp: CE32609:p.Asn30=
        cDNA_position: 685
        CDS_position: 90
        Protein_position: 30
        Exon_number: 3/5
        Codon_change: aaT/aaC
        Amino_acid_change: N
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw6179
  Method: WGS_Hawaiian_Waterston