WormBase Tree Display for Variation: WBVar00149365
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WBVar00149365 | Name | Public_name | WBVar00149365 | ||
---|---|---|---|---|---|
Other_name | haw2615 | ||||
Y71G12B.11a.1:c.2151-450C>A | |||||
Y71G12B.11e.1:c.1056-450C>A | |||||
Y71G12B.11b.1:c.2151-450C>A | |||||
Y71G12B.11f.1:c.1056-450C>A | |||||
Y71G12B.11c.1:c.161+312C>A | |||||
HGVSg | CHROMOSOME_I:g.1730367C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y71G12B | |
Flanking_sequences | tctgagactttgctttttttagacc | aaattggtccaaaactaccaaattttgtaa | |||
Mapping_target | Y71G12B | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00006771 | |||
Transcript | Y71G12B.11f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11f.1:c.1056-450C>A | ||||
Intron_number | 2/3 | ||||
Y71G12B.11c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11c.1:c.161+312C>A | ||||
Intron_number | 2/6 | ||||
Y71G12B.11e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11e.1:c.1056-450C>A | ||||
Intron_number | 2/6 | ||||
Y71G12B.11a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11a.1:c.2151-450C>A | ||||
Intron_number | 6/11 | ||||
Y71G12B.11b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71G12B.11b.1:c.2151-450C>A | ||||
Intron_number | 6/12 | ||||
Remark | [20081124 db] this Variation was previously named hw2615 | ||||
Method | WGS_Hawaiian_Waterston |