WormBase Tree Display for Variation: WBVar00146977

WBVar00146977 Name: Public_name: WBVar00146977
    Other_name: haw227
      haw112256
      cewivar00160299
      F56C11.1.2:c.*544T>A
      F53G12.18.1:c.145-312A>T
    HGVSg: CHROMOSOME_I:g.146079A>T
  Sequence_details: SMap: S_parent: Sequence: F53G12
    Flanking_sequences: taatgattttgaccagtgtcagctc aaaaaaatacgttgacagagagagg
    Mapping_target: F53G12
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00532121
        WBVar01276729
    Status: Live
  Affects: Gene: WBGene00271776
      WBGene00000253
    Transcript: F53G12.18.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53G12.18.1:c.145-312A>T
        Intron_number: 2/3
      F56C11.1.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F56C11.1.2:c.*544T>A
        cDNA_position: 5074
        Exon_number: 21/21
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw227
  Method: WGS_Hawaiian_Waterston