WormBase Tree Display for Variation: WBVar00146455

WBVar00146455 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h142
    Other_name: F55C7.7i.1:c.3159G>A
      F55C7.7i.2:c.3159G>A
      CE19464:p.Trp1053Ter
      CE36937:p.Trp1053Ter
      CE19465:p.Trp1053Ter
      F55C7.7b.1:c.3159G>A
      F55C7.7a.1:c.3159G>A
    HGVSg: CHROMOSOME_I:g.4023676C>T
  Sequence_details: SMap: S_parent: Sequence: F55C7
    Flanking_sequences: TTAGATAAACTAACCCTTCCAACAACAATTTTTTCTGCAT CATAGCTCGAGAATATTCGATTGTCGTTCTCGAATATTGT
    Mapping_target: CHROMOSOME_I
    Source_location: 200 CHROMOSOME_I 4023677 4023677
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023707
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00006805
    Transcript: F55C7.7i.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F55C7.7i.1:c.3159G>A
        HGVSp: CE36937:p.Trp1053Ter
        cDNA_position: 3159
        CDS_position: 3159
        Protein_position: 1053
        Exon_number: 12/26
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F55C7.7b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F55C7.7b.1:c.3159G>A
        HGVSp: CE19465:p.Trp1053Ter
        cDNA_position: 3159
        CDS_position: 3159
        Protein_position: 1053
        Exon_number: 12/21
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F55C7.7a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F55C7.7a.1:c.3159G>A
        HGVSp: CE19464:p.Trp1053Ter
        cDNA_position: 3271
        CDS_position: 3159
        Protein_position: 1053
        Exon_number: 13/34
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
      F55C7.7i.2 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F55C7.7i.2:c.3159G>A
        HGVSp: CE36937:p.Trp1053Ter
        cDNA_position: 3159
        CDS_position: 3159
        Protein_position: 1053
        Exon_number: 12/25
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: I -1.85381
  Description: Phenotype: WBPhenotype:0000062 Paper_evidence: WBPaper00040589
        Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Paper_evidence: WBPaper00003985
        Curator_confirmed: WBPerson712
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: Substitution_allele