WormBase Tree Display for Variation: WBVar00145496
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WBVar00145496 | Name | Public_name | gk41 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.5278263_5278984delinsAT | ||||
Sequence_details | SMap | S_parent | Sequence | C01G8 | |
Flanking_sequences | tttgacattctcgtgttgttacatgttcct | gttgtcaaaaaccggaacaatttaatatat | |||
Mapping_target | C01G8 | ||||
Type_of_mutation | Insertion | at | |||
Deletion | |||||
PCR_product | GK41_external | ||||
GK41_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035515 | ||||
WBStrain00040677 | |||||
WBStrain00040680 | |||||
WBStrain00040681 | |||||
WBStrain00040682 | |||||
Laboratory | VC | ||||
XT | |||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000965 | |||
WBGene00000540 | |||||
Transcript | C01G8.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
Intron_number | 2-3/10 | ||||
Exon_number | 1-3/11 | ||||
C01G8.3.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
cDNA_position | 1043-? | ||||
Exon_number | 10/10 | ||||
Genetics | Mapping_data | In_multi_point | 4226 | ||
Disease_info | Models_disease | DOID:14503 | |||
Models_disease_in_annotation | WBDOannot00000120 | ||||
Reference | WBPaper00066025 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |