Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00145496

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00145496NamePublic_namegk41
HGVSgCHROMOSOME_I:g.5278263_5278984delinsAT
Sequence_detailsSMapS_parentSequenceC01G8
Flanking_sequencestttgacattctcgtgttgttacatgttcctgttgtcaaaaaccggaacaatttaatatat
Mapping_targetC01G8
Type_of_mutationInsertionat
Deletion
PCR_productGK41_external
GK41_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00035515
WBStrain00040677
WBStrain00040680
WBStrain00040681
WBStrain00040682
LaboratoryVC
XT
PersonWBPerson427
KO_consortium_allele
StatusLive
AffectsGeneWBGene00000965
WBGene00000540
TranscriptC01G8.2.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
Intron_number2-3/10
Exon_number1-3/11
C01G8.3.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position1043-?
Exon_number10/10
GeneticsMapping_dataIn_multi_point4226
Disease_infoModels_diseaseDOID:14503
Models_disease_in_annotationWBDOannot00000120
ReferenceWBPaper00066025
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele