WormBase Tree Display for Variation: WBVar00145298
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WBVar00145298 | Name | Public_name | ez16 | ||||
---|---|---|---|---|---|---|---|
Other_name | B0286.1.2:c.415-337C>T | ||||||
B0286.5.1:c.3G>A | |||||||
CE03865:p.Met1? | |||||||
B0286.1.1:c.415-337C>T | |||||||
HGVSg | CHROMOSOME_II:g.4383286C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | B0286 | |||
Flanking_sequences | ccccctaccataaaaaaatacaataatcat | actcgccatcaaacacatcttccatttcat | |||||
Mapping_target | B0286 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00006485 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006445 | ||||||
Laboratory | DZ | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00015115 | |||||
WBGene00001438 | |||||||
Transcript | B0286.1.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | B0286.1.1:c.415-337C>T | ||||||
Intron_number | 5/8 | ||||||
B0286.5.1 (12) | |||||||
B0286.1.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | B0286.1.2:c.415-337C>T | ||||||
Intron_number | 6/9 | ||||||
Interactor | WBInteraction000504413 | ||||||
Genetics | Interpolated_map_position | II | -4.72869 | ||||
Remark | Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00001438 Missense 1 M to I | Paper_evidence | WBPaper00006485 | ||||
Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00015115 Intron Inferred_automatically map_alleles.pl | |||||||
Method | Substitution_allele |