WormBase Tree Display for Variation: WBVar00144317
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| WBVar00144317 | Evidence | Paper_evidence | WBPaper00005786 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e1805 | |||||
| Other_name | F59C6.7a.1:c.655C>T | ||||||
| F59C6.7b.1:c.394C>T | |||||||
| CE11472:p.Gln132Ter | |||||||
| CE31704:p.Gln219Ter | |||||||
| HGVSg | CHROMOSOME_I:g.10507890G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F59C6 | |||
| Flanking_sequences | gaattttgatgagtttcagaagaatccactc | aaagcgttctccaaagcaatacggatgcaat | |||||
| Mapping_target | F59C6 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00005786 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004474 | ||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00000492 | |||||
| Transcript | F59C6.7b.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F59C6.7b.1:c.394C>T | ||||||
| HGVSp | CE11472:p.Gln132Ter | ||||||
| cDNA_position | 394 | ||||||
| CDS_position | 394 | ||||||
| Protein_position | 132 | ||||||
| Exon_number | 4/6 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| F59C6.7a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F59C6.7a.1:c.655C>T | ||||||
| HGVSp | CE31704:p.Gln219Ter | ||||||
| cDNA_position | 735 | ||||||
| CDS_position | 655 | ||||||
| Protein_position | 219 | ||||||
| Exon_number | 8/11 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000520976 | ||||||
| Genetics | Interpolated_map_position | I | 5.05407 | ||||
| Mapping_data (3) | |||||||
| Description (2) | |||||||
| Disease_info | Models_disease | DOID:0060340 | |||||
| Models_disease_in_annotation | WBDOannot00000211 | ||||||
| Reference | WBPaper00000932 | ||||||
| WBPaper00035071 | |||||||
| WBPaper00028448 | |||||||
| WBPaper00029016 | |||||||
| WBPaper00006052 | |||||||
| WBPaper00002087 | |||||||
| WBPaper00001786 | |||||||
| WBPaper00017262 | |||||||
| WBPaper00016325 | |||||||
| WBPaper00064927 | |||||||
| Method | Substitution_allele |
