WormBase Tree Display for Variation: WBVar00143936
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WBVar00143936 | Evidence | Paper_evidence | WBPaper00003888 | ||
---|---|---|---|---|---|
Name | Public_name | e1348 | |||
Other_name | CE18951:p.Gln160Ter | ||||
T09A5.10.1:c.478C>T | |||||
T09A5.10.2:c.478C>T | |||||
HGVSg | CHROMOSOME_II:g.7861183C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T09A5 | |
Flanking_sequences | tgggcatgtcttcggagagatgacgaagat | aggaagcatccagtggcttcaggactccga | |||
Mapping_target | T09A5 | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004404 | ||||
WBStrain00034590 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00002994 | |||
Transcript | T09A5.10.2 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | T09A5.10.2:c.478C>T | ||||
HGVSp | CE18951:p.Gln160Ter | ||||
cDNA_position | 479 | ||||
CDS_position | 478 | ||||
Protein_position | 160 | ||||
Exon_number | 3/8 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T09A5.10.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T09A5.10.1:c.478C>T | ||||
HGVSp | CE18951:p.Gln160Ter | ||||
cDNA_position | 564 | ||||
CDS_position | 478 | ||||
Protein_position | 160 | ||||
Exon_number | 3/8 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
Genetics | Interpolated_map_position | II | 0.586618 | ||
Mapping_data | In_multi_point | 50 | |||
705 | |||||
711 | |||||
In_pos_neg_data | 1359 | ||||
1391 | |||||
1465 | |||||
1473 | |||||
1480 | |||||
1484 | |||||
1497 | |||||
1505 | |||||
1509 | |||||
Description (2) | |||||
Reference (5) | |||||
Method | Substitution_allele |