WormBase Tree Display for Variation: WBVar00143927
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WBVar00143927 | Evidence | Paper_evidence | WBPaper00000502 | ||
---|---|---|---|---|---|
Name | Public_name | e1336 | |||
Other_name (19) | |||||
HGVSg | CHROMOSOME_V:g.6960399C>T | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00003165 | |||
Transcript | T07H8.4e.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4e.1:c.2464C>T | ||||
HGVSp | CE37672:p.Gln822Ter | ||||
cDNA_position | 2464 | ||||
CDS_position | 2464 | ||||
Protein_position | 822 | ||||
Exon_number | 11/28 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4b.1:c.2611C>T | ||||
HGVSp | CE47875:p.Gln871Ter | ||||
cDNA_position | 2611 | ||||
CDS_position | 2611 | ||||
Protein_position | 871 | ||||
Exon_number | 13/26 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4i.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4i.1:c.2611C>T | ||||
HGVSp | CE47870:p.Gln871Ter | ||||
cDNA_position | 2611 | ||||
CDS_position | 2611 | ||||
Protein_position | 871 | ||||
Exon_number | 13/13 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4a.1:c.2623C>T | ||||
HGVSp | CE48078:p.Gln875Ter | ||||
cDNA_position | 2676 | ||||
CDS_position | 2623 | ||||
Protein_position | 875 | ||||
Exon_number | 14/32 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4h.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4h.1:c.2620C>T | ||||
HGVSp | CE48065:p.Gln874Ter | ||||
cDNA_position | 2620 | ||||
CDS_position | 2620 | ||||
Protein_position | 874 | ||||
Exon_number | 13/30 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4d.2 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4d.2:c.2587C>T | ||||
HGVSp | CE47967:p.Gln863Ter | ||||
cDNA_position | 2588 | ||||
CDS_position | 2587 | ||||
Protein_position | 863 | ||||
Exon_number | 14/31 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4c.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4c.1:c.2611C>T | ||||
HGVSp | CE47886:p.Gln871Ter | ||||
cDNA_position | 2611 | ||||
CDS_position | 2611 | ||||
Protein_position | 871 | ||||
Exon_number | 13/14 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4f.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4f.1:c.2056C>T | ||||
HGVSp | CE37673:p.Gln686Ter | ||||
cDNA_position | 2544 | ||||
CDS_position | 2056 | ||||
Protein_position | 686 | ||||
Exon_number | 13/30 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4g.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4g.1:c.1414C>T | ||||
HGVSp | CE37674:p.Gln472Ter | ||||
cDNA_position | 1414 | ||||
CDS_position | 1414 | ||||
Protein_position | 472 | ||||
Exon_number | 5/22 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
T07H8.4d.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T07H8.4d.1:c.2587C>T | ||||
HGVSp | CE47967:p.Gln863Ter | ||||
cDNA_position | 2640 | ||||
CDS_position | 2587 | ||||
Protein_position | 863 | ||||
Exon_number | 14/32 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
Genetics | Interpolated_map_position | V | 0.482537 | ||
Description | Phenotype (3) | ||||
Reference | WBPaper00000502 | ||||
Method | Substitution_allele |