WormBase Tree Display for Variation: WBVar00143892
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WBVar00143892 | Evidence | Paper_evidence | WBPaper00004282 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1287 | |||||
Other_name | F29C4.1b.1:c.605G>A | ||||||
F29C4.1a.1:c.605G>A | |||||||
CE17719:p.Trp202Ter | |||||||
CE31492:p.Trp202Ter | |||||||
HGVSg | CHROMOSOME_IV:g.135550G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F29C4 | |||
Flanking_sequences | ccagaaaatcatgggaggcgaaattcgact | gtatataagattcaagccaaaacctggaga | |||||
Mapping_target | F29C4 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00004282 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000897 | |||||
Transcript | F29C4.1b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F29C4.1b.1:c.605G>A | ||||||
HGVSp | CE31492:p.Trp202Ter | ||||||
cDNA_position | 605 | ||||||
CDS_position | 605 | ||||||
Protein_position | 202 | ||||||
Exon_number | 5/9 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
F29C4.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F29C4.1a.1:c.605G>A | ||||||
HGVSp | CE17719:p.Trp202Ter | ||||||
cDNA_position | 640 | ||||||
CDS_position | 605 | ||||||
Protein_position | 202 | ||||||
Exon_number | 6/11 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
Interactor | WBInteraction000052156 | ||||||
WBInteraction000500201 | |||||||
Genetics (2) | |||||||
Description (2) | |||||||
Reference | WBPaper00000932 | ||||||
WBPaper00028386 | |||||||
WBPaper00050676 | |||||||
Method | Substitution_allele |