WormBase Tree Display for Variation: WBVar00143718
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WBVar00143718 | Name | Public_name | e1066 | ||||
---|---|---|---|---|---|---|---|
Other_name (8) | |||||||
HGVSg | CHROMOSOME_V:g.6961420G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T07H8 | |||
Flanking_sequences | aattccccaccgacatgcccatgtatggag | taaaattcaaataacaattgttccattttc | |||||
Mapping_target | T07H8 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024622 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004236 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00003165 | |||||
Transcript | T07H8.4e.1 | VEP_consequence | splice_donor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4e.1:c.3358+1G>A | ||||||
Intron_number | 13/27 | ||||||
T07H8.4b.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4b.1:c.3505+1G>A | ||||||
Intron_number | 15/25 | ||||||
T07H8.4a.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4a.1:c.3517+1G>A | ||||||
Intron_number | 16/31 | ||||||
T07H8.4h.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4h.1:c.3514+1G>A | ||||||
Intron_number | 15/29 | ||||||
T07H8.4d.2 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4d.2:c.3481+1G>A | ||||||
Intron_number | 16/30 | ||||||
T07H8.4f.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4f.1:c.2950+1G>A | ||||||
Intron_number | 15/29 | ||||||
T07H8.4g.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4g.1:c.2308+1G>A | ||||||
Intron_number | 7/21 | ||||||
T07H8.4d.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | T07H8.4d.1:c.3481+1G>A | ||||||
Intron_number | 16/31 | ||||||
Genetics | Interpolated_map_position | V | 0.482729 | ||||
Mapping_data | In_2_point | 127 | |||||
In_multi_point | 139 | ||||||
140 | |||||||
In_pos_neg_data | 844 | ||||||
861 | |||||||
1746 | |||||||
Description (2) | |||||||
Reference | WBPaper00038449 | ||||||
WBPaper00031671 | |||||||
WBPaper00000932 | |||||||
WBPaper00006052 | |||||||
WBPaper00000214 | |||||||
WBPaper00000502 | |||||||
WBPaper00055368 | |||||||
Method | Substitution_allele |