WormBase Tree Display for Variation: WBVar00143592
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WBVar00143592 | Name | Public_name | e912 | ||
---|---|---|---|---|---|
Other_name | F59G1.4a.1:c.250-263_947-68del | ||||
HGVSg | CHROMOSOME_II:g.5896964_5902373del | ||||
Sequence_details | SMap | S_parent | Sequence | F59G1 | |
Flanking_sequences | aggaaggaacaagtcgatcggaaaatttta | ttttcacactgggagctagttccaataaaa | |||
Mapping_target | F59G1 | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004403 | ||||
WBStrain00006311 | |||||
WBStrain00026764 | |||||
WBStrain00026863 | |||||
WBStrain00027055 | |||||
WBStrain00027229 | |||||
WBStrain00027586 | |||||
WBStrain00040213 | |||||
WBStrain00040275 | |||||
WBStrain00051497 | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene (5) | ||||
Transcript | F59G1.6 | ||||
F59G1.13 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
F59G1.10 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
F59G1.4a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F59G1.4a.1:c.250-263_947-68del | ||||
Intron_number | 4-10/14 | ||||
Exon_number | 5-10/15 | ||||
F59G1.12 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
Interactor (17) | |||||
Isolation | Mutagen | ||||
Genetics | Interpolated_map_position | II | -0.855656 | ||
Mapping_data | In_2_point | 40 | |||
777 | |||||
4220 | |||||
In_multi_point (11) | |||||
In_pos_neg_data | 3708 | ||||
4223 | |||||
4224 | |||||
Description | Phenotype (23) | ||||
Phenotype_not_observed (5) | |||||
Reference (35) | |||||
Method | Deletion_allele |