WormBase Tree Display for Variation: WBVar00143269
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WBVar00143269 | Evidence | Paper_evidence | WBPaper00026992 | ||||
---|---|---|---|---|---|---|---|
WBPaper00006395 | |||||||
Name | Public_name | e518 | |||||
Other_name | F45G2.5.1:c.167C>T | ||||||
CE16048:p.Ser56Leu | |||||||
HGVSg | CHROMOSOME_III:g.13429087G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | |||
Flanking_sequences | ctgagaatacaattcgaaagaaaagtgcat | aagagaatgggtttgtttggcaactaatga | |||||
Mapping_target | F45G2 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00026992 | ||
WBPaper00006395 | |||||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004175 | ||||||
WBStrain00029049 | |||||||
WBStrain00034353 | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000255 | |||||
Transcript | F45G2.5.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | F45G2.5.1:c.167C>T | ||||||
HGVSp | CE16048:p.Ser56Leu | ||||||
cDNA_position | 222 | ||||||
CDS_position | 167 | ||||||
Protein_position | 56 | ||||||
Exon_number | 3/6 | ||||||
Codon_change | tCa/tTa | ||||||
Amino_acid_change | S/L | ||||||
Interactor | WBInteraction000537317 | ||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00026992 | |||
Genetics | Interpolated_map_position | III | 21.2139 | ||||
Mapping_data | In_2_point | 82 | |||||
483 | |||||||
In_multi_point (10) | |||||||
In_pos_neg_data (3) | |||||||
Description (2) | |||||||
Reference | WBPaper00001328 | ||||||
WBPaper00000031 | |||||||
WBPaper00004883 | |||||||
WBPaper00005747 | |||||||
Method | Substitution_allele |