WormBase Tree Display for Variation: WBVar00143075
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WBVar00143075 | Evidence | Paper_evidence | WBPaper00041308 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e268 | |||||
Other_name | CE45298:p.Trp1096Ter | ||||||
C27H6.1b.1:c.3561G>A | |||||||
CE45344:p.Trp1469Ter | |||||||
C27H6.1a.1:c.4407G>A | |||||||
C27H6.1c.1:c.3288G>A | |||||||
CE45373:p.Trp1187Ter | |||||||
HGVSg | CHROMOSOME_V:g.9967695C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C27H6 | |||
Flanking_sequences | GATTTATTTATTCCGAGAAGAACGTCATTG | GGAGTAGGATCAATTCATTCCAAAAAACTT | |||||
Mapping_target | C27H6 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00041308 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (3) | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006777 | |||||
Transcript | C27H6.1b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1b.1:c.3561G>A | ||||||
HGVSp | CE45373:p.Trp1187Ter | ||||||
cDNA_position | 3561 | ||||||
CDS_position | 3561 | ||||||
Protein_position | 1187 | ||||||
Exon_number | 8/11 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C27H6.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1a.1:c.4407G>A | ||||||
HGVSp | CE45344:p.Trp1469Ter | ||||||
cDNA_position | 4419 | ||||||
CDS_position | 4407 | ||||||
Protein_position | 1469 | ||||||
Exon_number | 11/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C27H6.1c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1c.1:c.3288G>A | ||||||
HGVSp | CE45298:p.Trp1096Ter | ||||||
cDNA_position | 3288 | ||||||
CDS_position | 3288 | ||||||
Protein_position | 1096 | ||||||
Exon_number | 6/8 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
Interactor | WBInteraction000518832 | ||||||
Genetics | Interpolated_map_position | V | 2.22222 | ||||
Mapping_data (3) | |||||||
Description (2) | |||||||
Reference | WBPaper00041308 | ||||||
WBPaper00028886 | |||||||
WBPaper00000031 | |||||||
WBPaper00002007 | |||||||
Method | Substitution_allele |