WormBase Tree Display for Variation: WBVar00142821
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WBVar00142821 | Evidence | Paper_evidence | WBPaper00005054 | ||
---|---|---|---|---|---|
Name | Public_name | dh11 | |||
Other_name | T13C5.1c.1:c.1508-1G>A | ||||
T13C5.1a.1:c.1616-1G>A | |||||
T13C5.1b.1:c.1571-1G>A | |||||
HGVSg | CHROMOSOME_X:g.6200500G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T13C5 | |
Flanking_sequences | gcaaacaacaaattcaacattaacgtttca | gagatccaatcccagtggccgaacgtgtga | |||
Mapping_target | T13C5 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | AA | ||||
Status | Live | ||||
Affects | Gene | WBGene00000905 | |||
Transcript | T13C5.1c.1 | VEP_consequence | splice_acceptor_variant | ||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1c.1:c.1508-1G>A | ||||
Intron_number | 8/9 | ||||
T13C5.1b.1 | VEP_consequence | splice_acceptor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1b.1:c.1571-1G>A | ||||
Intron_number | 9/9 | ||||
T13C5.1a.1 | VEP_consequence | splice_acceptor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1a.1:c.1616-1G>A | ||||
Intron_number | 11/12 | ||||
Genetics | Interpolated_map_position | X | -3.45436 | ||
Reference | WBPaper00005054 | ||||
Method | Substitution_allele |