WormBase Tree Display for Variation: WBVar00142817
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WBVar00142817 | Evidence | Paper_evidence | WBPaper00005054 | ||
---|---|---|---|---|---|
Name | Public_name | dh7 | |||
Other_name (6) | |||||
HGVSg | CHROMOSOME_X:g.6200105_6200106delinsAA | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | AA | ||||
Status | Live | ||||
Affects | Gene | WBGene00000905 | |||
Transcript | T13C5.1c.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1c.1:c.1211_1212delinsAA | ||||
HGVSp | CE53632:p.Trp404Ter | ||||
cDNA_position | 1211-1212 | ||||
CDS_position | 1211-1212 | ||||
Protein_position | 404 | ||||
Exon_number | 7/10 | ||||
Codon_change | tGG/tAA | ||||
Amino_acid_change | W/* | ||||
T13C5.1b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1b.1:c.1274_1275delinsAA | ||||
HGVSp | CE30451:p.Trp425Ter | ||||
cDNA_position | 1274-1275 | ||||
CDS_position | 1274-1275 | ||||
Protein_position | 425 | ||||
Exon_number | 8/10 | ||||
Codon_change | tGG/tAA | ||||
Amino_acid_change | W/* | ||||
T13C5.1a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | T13C5.1a.1:c.1319_1320delinsAA | ||||
HGVSp | CE27206:p.Trp440Ter | ||||
cDNA_position | 1380-1381 | ||||
CDS_position | 1319-1320 | ||||
Protein_position | 440 | ||||
Exon_number | 10/13 | ||||
Codon_change | tGG/tAA | ||||
Amino_acid_change | W/* | ||||
Genetics | Interpolated_map_position | X | -3.45871 | ||
Reference | WBPaper00005054 | ||||
Remark | Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00000905 Amber_UAG_or_Opal_UGA W(440) to stop | Paper_evidence | WBPaper00005054 | ||
Method | Substitution_allele |