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WormBase Tree Display for Variation: WBVar00127717

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Name Class

WBVar00127717EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00127717
Other_namecbs63238
HGVSgchrI:g.14742817T>C
Sequence_detailsSMapS_parentSequencecb25.fpc4140
Flanking_sequencesaaagaggaggaggccatctggagattattgggcaatttaagctcatccttacctaatccgaagtcaaaatcggattaggtgaaggagagaatcattgtga
Mapping_targetcb25.fpc4140
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (11)
Polymorphic_strain_digest (11)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00038900
TranscriptCBG19730.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG19730.1:c.5683-86A>G
Intron_number9/10
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP