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WormBase Tree Display for Variation: WBVar00121645

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Name Class

WBVar00121645EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00121645
Other_namecbs57166
HGVSgchrX:g.10934668T>G
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencesacaactacggattctgtgcaggactcaaggtatggaaaacttatgtgaacaagcattccgagatctgcaattttttaaaagttactcaaaaaactgagaa
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (12)
Polymorphic_strain_digest (12)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00271362
TranscriptCBG30744.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG30744.1:c.231+22A>C
Intron_number2/3
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP