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WormBase Tree Display for Variation: WBVar00121528

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Name Class

WBVar00121528EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00121528
Other_namecbs57049
cb57049Paper_evidenceWBPaper00055507
HGVSgchrX:g.10252582T>C
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencestcacaagctgaaggcctctctggcactactaaagaagctatcaagaaaac
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (15)
Polymorphic_strain_digest (15)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00035018
TranscriptCBG14565.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScCBG14565.1:c.775T>C
HGVSpCBP18061.1:p.Thr259Pro
cDNA_position775
CDS_position775
Protein_position259
Exon_number7/8
Codon_changeAct/Cct
Amino_acid_changeT/P
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP