Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00121445

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00121445EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00121445
Other_namecbs56966
cb56966Paper_evidenceWBPaper00055507
HGVSg
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencesaactgctaaaagcgaagtgtttgtccacttctgataaatgagattataca
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (12)
Polymorphic_strain_digest (12)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00089115
TranscriptCBG27701.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVSpCBP34214.1:p.Ala71Pro
cDNA_position214
CDS_position211
Protein_position71
Exon_number3/5
Codon_changeGca/Cca
Amino_acid_changeA/P
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP