WormBase Tree Display for Variation: WBVar00121359
expand all nodes | collapse all nodes | view schema
WBVar00121359 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00121359 | ||||
Other_name | cbs56880 | |||||
cb56880 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc3857a | ||
Flanking_sequences | cgcaatttgacaatagttgaaaagc | aatattttagtttttcataggaaaa | ||||
Mapping_target | cb25.fpc3857a | |||||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | RGCY | CviJI, CviTI | 253 217 191 122 118 71 28 | ||
GTYRAC | HincII, HindII | 1000 | ||||
GTNNAC | Hpy8I | 640 344 10 6 | ||||
Polymorphic_strain_digest | RGCY | CviJI, CviTI | 253 217 191 122 118 99 | |||
GTYRAC | HincII, HindII | 782 218 | ||||
GTNNAC | Hpy8I | 640 202 142 10 6 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 2 sequencing read(s) | ||||||
Method | SNP |