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WormBase Tree Display for Variation: WBVar00121253

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Name Class

WBVar00121253EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00121253
Other_namecbs56774
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencescatgctataagtcaaacttccgttgatagacgctgaccttgtccttgtgaattgaactgtctccttattttctaccaagtgacgagtttcgattttgtct
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestGACNNNGTCAspI, PflFI, PsyI, TelI, Tth111I511 489
CACHindI104 98 71 69 66 65 62 56 44 43 41 41 35 33 26 21 21 16 14 13 13 12 11 8 6 4 3 2 2
AATTSse9I, TasI, Tsp509I, TspEI283 166 127 92 84 56 50 49 44 22 14 9 4
Polymorphic_strain_digestGACNNNGTCAspI, PflFI, PsyI, TelI, Tth111I489 448 63
CACHindI104 98 98 71 69 66 62 56 44 43 41 41 35 26 21 21 16 14 13 13 12 11 8 6 4 3 2 2
AATTSse9I, TasI, Tsp509I, TspEI339 166 127 92 84 50 49 44 22 14 9 4
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP