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WormBase Tree Display for Variation: WBVar00121128

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Name Class

WBVar00121128EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00121128
Other_namecbs56649
HGVSgchrX:g.8556471A>C
Sequence_detailsSMapS_parentSequencecb25.fpc3857a
Flanking_sequencesaccatttcaaaatgacctagaaaatacaccagggccatgccagggcattttaggccatgaagaagtggtggcctagaaaaacaaattcgcaaaagatagg
Mapping_targetcb25.fpc3857a
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (13)
Polymorphic_strain_digest (13)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00034787
TranscriptCBG14217.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG14217.1:c.-5-1406A>C
Intron_number1/5
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP