WormBase Tree Display for Variation: WBVar00121088

WBVar00121088 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00121088
    Other_name: cbs56609
      cb56609 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: acgcccttggttcacaattttcagc aaagttccagccaaaatacaaaaaa
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RAATTY AcsI, ApoI, XapI 235 196 188 157 89 60 45 30
        GCNGC BthCI, Fnu4HI, Fsp4HI, ItaI, SatI 586 156 134 124
        RGCY CviJI, CviTI 287 277 233 110 31 26 24 12
        TCGA EsaBC3I, TaqI, TthHB8I 612 289 43 34 22
        AATT Sse9I, TasI, Tsp509I, TspEI 179 157 114 76 69 57 56 49 46 37 35 30 28 21 14 13 11 8
        GCWGC TseI 723 277
      Polymorphic_strain_digest: RAATTY AcsI, ApoI, XapI 235 196 157 128 89 60 60 45 30
        GCNGC BthCI, Fnu4HI, Fsp4HI, ItaI, SatI 710 156 134
        RGCY CviJI, CviTI 498 287 110 31 26 24 12 12
        TCGA EsaBC3I, TaqI, TthHB8I 612 275 43 34 22 14
        AATT Sse9I, TasI, Tsp509I, TspEI 6 37 35 30 28 25 24 21 14 13 11 8
        GCWGC TseI 1000
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP