WormBase Tree Display for Variation: WBVar00120901
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WBVar00120901 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00120901 | |||
Other_name | cbs56422 | ||||
HGVSg | chrX:g.7577279A>C | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc3857a | |
Flanking_sequences | aggatgttcttgtaaacaatgttatgcatgactttttctggagcccagactctgattccatccttagttcttgttcttgtcaatgcaacatatagctgtccatgagcaaaaatcggagcgtccagaagcagtccgatacgatcgaatgtt | ggccttgagccttattgatggtcatagcaaaggcaggtcttactgggaactgacgtctttggagcacgaatggaatccccgaatcgaataatagtttgat | |||
Mapping_target | cb25.fpc3857a | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | Reference_strain_digest (11) | ||||
Polymorphic_strain_digest (11) | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00089022 | |||
Transcript | CBG27608 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG27608.1:n.4576A>C | ||||
cDNA_position | 4576 | ||||
Exon_number | 7/7 | ||||
Reference | WBPaper00030778 | ||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |