WormBase Tree Display for Variation: WBVar00118133
expand all nodes | collapse all nodes | view schema
WBVar00118133 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00118133 | |||
Other_name | cbs53654 | ||||
HGVSg | chrI:g.7470587A>G | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2852 | |
Flanking_sequences | gggccgagagaaacagaggaagagagtaaagcggtaacatatgggatcgt | cttatagaaaaaaccattttcactgttttttcgaaatttcatcaaacatt | |||
Mapping_target | cb25.fpc2852 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | Reference_strain_digest (25) | ||||
Polymorphic_strain_digest (25) | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00033023 | |||
Transcript | CBG12008.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG12008.1:c.1256-67T>C | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00030778 | ||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 1 sequencing read(s) | |||||
Method | SNP |