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WormBase Tree Display for Variation: WBVar00118131

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Name Class

WBVar00118131EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00118131
Other_namecbs53652
HGVSgchrI:g.7470572A>T
Sequence_detailsSMapS_parentSequencecb25.fpc2852
Flanking_sequencestataacatatggagtgggccgagagaaacagaggaagagagtaaagcggtacatatgggatcgtacttatagaaaaaaccattttcactgttttttcgaa
Mapping_targetcb25.fpc2852
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (25)
Polymorphic_strain_digest (25)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00033023
TranscriptCBG12008.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG12008.1:c.1256-52T>A
Intron_number5/9
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP