WormBase Tree Display for Variation: WBVar00113900

WBVar00113900 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00113900
    Other_name: cbs49421
    HGVSg: chrV:g.7769296G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2051
    Flanking_sequences: caagcagtatcttaattattccagggacgctcccatccccaacaaggact tcatctgatcaaccaccattcggaggtgataatacccgtccaccatttaa
    Mapping_target: cb25.fpc2051
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (12)
      Polymorphic_strain_digest (12)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00088418
    Transcript: CBG27004.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG27004.1:c.690C>T
        HGVSp: CBP31001.1:p.Leu230%3D
        cDNA_position: 690
        CDS_position: 690
        Protein_position: 230
        Exon_number: 6/7
        Codon_change: ctC/ctT
        Amino_acid_change: L
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP