WormBase Tree Display for Variation: WBVar00113832
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WBVar00113832 | Evidence | Paper_evidence | WBPaper00030778 | ||
---|---|---|---|---|---|
WBPaper00055507 | |||||
Name | Public_name | WBVar00113832 | |||
Other_name | cbs49353 | ||||
cb49353 | Paper_evidence | WBPaper00055507 | |||
HGVSg | |||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2051 | |
Flanking_sequences | gtactttgtgttctttcatttctac | gttgtttacaagtgtcattgaatgg | |||
Mapping_target | cb25.fpc2051 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | Reference_strain_digest (14) | ||||
Polymorphic_strain_digest (14) | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041077 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00030349 | |||
Transcript | CBG08588.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSp | CBP44187.1:p.Cys515Ser | ||||
cDNA_position | 1779 | ||||
CDS_position | 1543 | ||||
Protein_position | 515 | ||||
Exon_number | 14/19 | ||||
Codon_change | Tgt/Agt | ||||
Amino_acid_change | C/S | ||||
Reference | WBPaper00030778 | ||||
WBPaper00055507 | |||||
Remark | Predicted by: ssaha-SNP v2.0 | ||||
This SNP was observed in 2 sequencing read(s) | |||||
Method | SNP |