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WormBase Tree Display for Variation: WBVar00113832

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Name Class

WBVar00113832EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00113832
Other_namecbs49353
cb49353Paper_evidenceWBPaper00055507
HGVSg
Sequence_detailsSMapS_parentSequencecb25.fpc2051
Flanking_sequencesgtactttgtgttctttcatttctacgttgtttacaagtgtcattgaatgg
Mapping_targetcb25.fpc2051
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digest (14)
Polymorphic_strain_digest (14)
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00030349
TranscriptCBG08588.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVSpCBP44187.1:p.Cys515Ser
cDNA_position1779
CDS_position1543
Protein_position515
Exon_number14/19
Codon_changeTgt/Agt
Amino_acid_changeC/S
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 2 sequencing read(s)
MethodSNP