WormBase Tree Display for Variation: WBVar00113816

WBVar00113816 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00113816
    Other_name: cbs49337
      cb49337 Paper_evidence: WBPaper00055507
    HGVSg: chrV:g.8095130G>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2051
    Flanking_sequences: aatattggatatcaacatgatttag atattatcaaaagattattgaagct
    Mapping_target: cb25.fpc2051
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TGATCA BclI, BsiQI, FbaI, Ksp22I 1000
        GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 562 268 170
        GGNNCC BscBI, BspLI, NlaIV, PspN4I 1000
        CAC HindI 138 121 114 112 76 64 63 45 44 36 33 32 25 25 19 18 13 9 9 2 2
      Polymorphic_strain_digest: TGATCA BclI, BsiQI, FbaI, Ksp22I 936 64
        GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 562 204 170 64
        GGNNCC BscBI, BspLI, NlaIV, PspN4I 983 17
        CAC HindI 138 121 114 112 76 64 63 45 36 36 33 32 25 25 19 18 13 9 9 8 2 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00030349
    Transcript: CBG08588.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG08588.1:c.191+34C>G
        Intron_number: 3/18
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP