WormBase Tree Display for Variation: WBVar00113711

WBVar00113711 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00113711
    Other_name: cbs49232
      cb49232 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2051
    Flanking_sequences: agctttactttattcaatggtgttt ccttttttgatcttattcttatggt
    Mapping_target: cb25.fpc2051
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GRCGYC AcyI, BsaHI, BstACI, Hin1I, Hsp92I 1000
        GAANNNNTTC Asp700I, MroXI, PdmI, XmnI 857 143
        TCGA EsaBC3I, TaqI, TthHB8I 563 194 116 64 63
        GANTC HinfI 330 184 181 161 111 33
        TCNNGA H, py178III, Hpy188III 321 199 148 128 125 79
        CGWCG Hpy99I 1000
        TTATAA PsiI 1000
        GAWTC TfiI 511 184 161 111 33
      Polymorphic_strain_digest: GRCGYC AcyI, BsaHI, BstACI, Hin1I, Hsp92I 642 358
        GAANNNNTTC Asp700I, MroXI, PdmI, XmnI 1000
        TCGA EsaBC3I, TaqI, TthHB8I 478 194 116 85 64 63
        GANTC HinfI 363 184 181 161 111
        TCNNGA H, py178III, Hpy188III 321 227 199 128 125
        CGWCG Hpy99I 640 360
        TTATAA PsiI 803 197
        GAWTC TfiI 544 184 161 111
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP