WormBase Tree Display for Variation: WBVar00111170

WBVar00111170 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00111170
    Other_name: cbs46691
    HGVSg: chrIV:g.7422785A>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0143a
    Flanking_sequences: ctcttcaatcatccgacactggatatggacttcaatcactcaaaacagat actcgggaaattcaggactcacgaaagacccaattggtacatctagctaa
    Mapping_target: cb25.fpc0143a
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GANTC HinfI 307 196 172 109 65 64 48 39
      Polymorphic_strain_digest: GANTC HinfI 307 196 172 93 65 64 48 39 16
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00028321
    Transcript: CBG05967.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG05967.1:c.583T>G
        HGVSp: CBP07196.1:p.Tyr195Asp
        cDNA_position: 646
        CDS_position: 583
        Protein_position: 195
        Exon_number: 4/7
        Codon_change: Tac/Gac
        Amino_acid_change: Y/D
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP