WormBase Tree Display for Variation: WBVar00111016

WBVar00111016 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00111016
    Other_name: cbs46537
      cb46537 Paper_evidence: WBPaper00055507
    HGVSg: chrIV:g.8058158T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0143a
    Flanking_sequences: aagtacctaaatttggaatgtgttc ataccgtaaaacctgtaatataagg
    Mapping_target: cb25.fpc0143a
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RAATTY AcsI, ApoI, XapI 488 259 243 10
        ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 464 264 101 91 49 31
        AATT Sse9I, TasI, Tsp509I, TspEI 268 259 106 68 63 55 48 47 42 25 10 9
      Polymorphic_strain_digest: RAATTY AcsI, ApoI, XapI 731 259 10
        ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 464 264 122 101 49
        AATT Sse9I, TasI, Tsp509I, TspEI 268 259 106 69 63 55 48 47 42 24 10 9
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00028158
    Transcript: CBG05771.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG05771.1:c.82+313A>G
        Intron_number: 3/13
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP