WormBase Tree Display for Variation: WBVar00105906
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| WBVar00105906 | Name | Public_name | WBVar00105906 | ||
|---|---|---|---|---|---|
| Other_name | pas10765 | ||||
| haw29039 | |||||
| haw133152 | |||||
| cewivar00095169 | |||||
| B0491.4a.1:c.*64T>C | |||||
| B0491.4b.1:c.*64T>C | |||||
| HGVSg | CHROMOSOME_II:g.11340227A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | B0491 | |
| Flanking_sequences | ttgaaacattttgtagaattgctgaaaatatgtaagtccaaagataagtgcttcgtgcaaaagtcttcgacactaccgtactcccatggctctgaagccggaacttgattgtgtgtatcagactatgaaaaaaattattttaaaaattttatcgcaaaaaatattacagatacgtaggcatcacaatgggacagaaatttccggtacgggagagaatggaaagtttgtataaatcaagtttgaagtataaaaataaggcgtggaaaacaggacagattgacagatttttttacagtgcgt | ggctcaggtggtgaacaaaaaaattttaaaatgatgataagcaagtttaaaactttccgcgttctaaaagaattccaagaaagtcatgaagagaaaaacggagaacatcaaagccgagaacatgttgttcatagccaaatagatgtgccgccaatcctgagtgtagtcgagctgaaacaataatttataagtttccaaatattcaggacctaagttctacctcggcgccaggtcttatcaccgactgctgctgactaacctcgcttgtagttcggctttccggagtgtcctcttccacgt | |||
| Mapping_target | B0491 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (162) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01439924 | |||
| WBVar01439925 | |||||
| WBVar01311771 | |||||
| WBVar00175789 | |||||
| WBVar00553017 | |||||
| WBVar01244743 | |||||
| WBVar01376660 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00007191 | |||
| Transcript | B0491.4b.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0491.4b.1:c.*64T>C | ||||
| cDNA_position | 1470 | ||||
| Exon_number | 12/12 | ||||
| B0491.4a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0491.4a.1:c.*64T>C | ||||
| cDNA_position | 1457 | ||||
| Exon_number | 12/12 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
