WormBase Tree Display for Variation: WBVar00105374
expand all nodes | collapse all nodes | view schema
WBVar00105374 | Name | Public_name | WBVar00105374 | ||
---|---|---|---|---|---|
Other_name | pas10233 | ||||
cewivar00093664 | |||||
F35H8.5a.1:c.-125G>T | |||||
HGVSg | CHROMOSOME_II:g.9576183G>T | ||||
Sequence_details | SMap | S_parent | Sequence | F35H8 | |
Flanking_sequences | TTCCTTCTCTTTGCTCTCACAACAACCGGAGCTCTTTCTTTTTGAAAAGA | CCCTCTTTTGTTTCCTGACAGACCAAGTGGAAGAAGTGGTGGTGTGTCAA | |||
Mapping_target | F35H8 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001368 | |||
Transcript | F35H8.5a.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F35H8.5a.1:c.-125G>T | ||||
cDNA_position | 213 | ||||
Exon_number | 1/9 | ||||
Method | WGS_Pasadena_Quinlan |