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WormBase Tree Display for Variation: WBVar00105012

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Name Class

WBVar00105012EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00105012
Other_namepas9871
cewivar00052019
Y43F8B.3f.1:c.275+34A>G
Y43F8B.3e.1:c.275+34A>G
Y43F8B.3h.1:c.275+34A>G
Y43F8B.3d.1:c.275+34A>G
Y43F8B.3a.1:c.275+34A>G
Y43F8B.3b.1:c.275+34A>G
Y43F8B.3c.1:c.275+34A>G
Y43F8B.3g.1:c.275+34A>G
HGVSgCHROMOSOME_V:g.19503869A>G
Sequence_detailsSMapS_parentSequenceY43F8B
Flanking_sequencescctaggttccgccgattttgatattttgggtcccgccacgccgggtactgtatctccagctaaaattgtttgaaatttcaaaattaacggaaactactcgatatgggtgtcatttttaaggtattagcacgagaatattgattttcataataaaaatttagtaaaatgtctagtttttttttcagccagccgctcacaacctccatctggacaatcttgtaccctgccacgtcagattggaactggaccctacagaattccaagatggtaatgtgttgttttttttcaatttttgaaaaagagaaaatttgggatattcaaaaaaaaaaaaaattttttcaaatttttcaattttttttgttgaaaatctctaaacttttccaatttttgaaaatcaataactaacccaatttttcacctaatttcaggtactataacccagtccgcggacgttgtgagctgttctattggtccggttgctgtggaaacggaaacaatttccagacgttccagacgtgccaatcgacctgcgaaggtgagcatttttcgggtttagatgtcaatttcactttgcagaatgtagaaaaaataattatgccc
Mapping_targetY43F8B
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (132)
LaboratoryQX
PersonWBPerson6900
WBPerson1730
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01465993
StatusLive
AffectsGeneWBGene00012814
TranscriptY43F8B.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3b.1:c.275+34A>G
Intron_number2/19
Y43F8B.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3g.1:c.275+34A>G
Intron_number2/18
Y43F8B.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3e.1:c.275+34A>G
Intron_number3/15
Y43F8B.3h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3h.1:c.275+34A>G
Intron_number3/16
Y43F8B.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3d.1:c.275+34A>G
Intron_number2/21
Y43F8B.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3a.1:c.275+34A>G
Intron_number3/17
Y43F8B.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3c.1:c.275+34A>G
Intron_number3/20
Y43F8B.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY43F8B.3f.1:c.275+34A>G
Intron_number3/19
ReferenceWBPaper00040707
MethodWGS_Pasadena_Quinlan