WormBase Tree Display for Variation: WBVar00105012
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WBVar00105012 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00105012 | |||
Other_name | pas9871 | ||||
cewivar00052019 | |||||
Y43F8B.3f.1:c.275+34A>G | |||||
Y43F8B.3e.1:c.275+34A>G | |||||
Y43F8B.3h.1:c.275+34A>G | |||||
Y43F8B.3d.1:c.275+34A>G | |||||
Y43F8B.3a.1:c.275+34A>G | |||||
Y43F8B.3b.1:c.275+34A>G | |||||
Y43F8B.3c.1:c.275+34A>G | |||||
Y43F8B.3g.1:c.275+34A>G | |||||
HGVSg | CHROMOSOME_V:g.19503869A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y43F8B | |
Flanking_sequences | cctaggttccgccgattttgatattttgggtcccgccacgccgggtactgtatctccagctaaaattgtttgaaatttcaaaattaacggaaactactcgatatgggtgtcatttttaaggtattagcacgagaatattgattttcataataaaaatttagtaaaatgtctagtttttttttcagccagccgctcacaacctccatctggacaatcttgtaccctgccacgtcagattggaactggaccctacagaattccaagatggtaatgtgttgttttttttcaatttttgaaaaa | gagaaaatttgggatattcaaaaaaaaaaaaaattttttcaaatttttcaattttttttgttgaaaatctctaaacttttccaatttttgaaaatcaataactaacccaatttttcacctaatttcaggtactataacccagtccgcggacgttgtgagctgttctattggtccggttgctgtggaaacggaaacaatttccagacgttccagacgtgccaatcgacctgcgaaggtgagcatttttcgggtttagatgtcaatttcactttgcagaatgtagaaaaaataattatgccc | |||
Mapping_target | Y43F8B | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (132) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01465993 | |||
Status | Live | ||||
Affects | Gene | WBGene00012814 | |||
Transcript | Y43F8B.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3b.1:c.275+34A>G | ||||
Intron_number | 2/19 | ||||
Y43F8B.3g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3g.1:c.275+34A>G | ||||
Intron_number | 2/18 | ||||
Y43F8B.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3e.1:c.275+34A>G | ||||
Intron_number | 3/15 | ||||
Y43F8B.3h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3h.1:c.275+34A>G | ||||
Intron_number | 3/16 | ||||
Y43F8B.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3d.1:c.275+34A>G | ||||
Intron_number | 2/21 | ||||
Y43F8B.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3a.1:c.275+34A>G | ||||
Intron_number | 3/17 | ||||
Y43F8B.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3c.1:c.275+34A>G | ||||
Intron_number | 3/20 | ||||
Y43F8B.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y43F8B.3f.1:c.275+34A>G | ||||
Intron_number | 3/19 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |