WormBase Tree Display for Variation: WBVar00104557
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| WBVar00104557 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00104557 | |||
| Other_name | pas9416 | ||||
| cewivar00091876 | |||||
| F35D2.4.1:c.*123T>C | |||||
| F35D2.6.1:c.1598A>G | |||||
| CE44463:p.Asp533Gly | |||||
| HGVSg | CHROMOSOME_II:g.7580147A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F35D2 | |
| Flanking_sequences | tagtgatgagaaagaatgctttgttacacattttcatgaaggcaaattatttatggctgctacaggagatcagtgcgaacgaaacattgattttgccaaaaaccaagatttaattatggttttggaggagaaacgtaagagttattttgattttttttgattttccattcagaacttcagaaacttgccgaaatcacacattcaagtcaagaaagccaacaactcccataaagcttcacgcatctcctatacttgaattaaacacaacttctactccagaagaacaaactacaacaatag | catatcagttttatcagatgaattctggttttcttcagcattcagaacaaatcaagtaacatcgctaataattattttcttatttttaattcaatagacaatcgtaaaaaaatgaattaatattaaacaagaaatcgttgatctactaaactcgtcttaatcaaatgattcgttgacaagtaaccgaaaatcaaacggatcaagtgagaaataacatacacaacaaaaccagcaagatataaagatccagaccataaatagaagactgtaactgttaaacattcaaatgaagtccaagcc | |||
| Mapping_target | F35D2 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (39) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01438505 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018042 | |||
| WBGene00194916 | |||||
| Transcript | F35D2.6.1 (12) | ||||
| F35D2.4.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D2.4.1:c.*123T>C | ||||
| cDNA_position | 2915 | ||||
| Exon_number | 14/14 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
