WormBase Tree Display for Variation: WBVar00104389
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| WBVar00104389 | Name | Public_name | WBVar00104389 | ||
|---|---|---|---|---|---|
| Other_name | pas9248 | ||||
| haw26241 | |||||
| haw131276 | |||||
| cewivar00091281 | |||||
| C15F1.3a.1:c.2750+245T>C | |||||
| C15F1.3b.1:c.2750+245T>C | |||||
| HGVSg | CHROMOSOME_II:g.6961328A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C15F1 | |
| Flanking_sequences | tcttagcagctttcgactcacacgcacacacataagcaaaaagagcaagtgctgggaagaggtgtcggattttgatgagcaacttccgataaagtgcatttgaactttttctcagagaaatgattaaaatacgcgattaatgagaaaaaatagagaaaatgaatgcactttaggagaggatatctaagaaaagtttcagaaatagaaaaagcacttaaaaatctcaaaacttaaactttctgctgttggaaattaatcagtacatgctaactgggtggcggtaaattttcggaaacaaaa | tgctgctcctaaaatgccaaaacgagaagaaaactcttgataacatgaattatttggatgccaaataattagtttgaattcgataagaagatggacctacagtaagacactggtggccaatttgtgtaaaagcagaacgtttcgaaaaaaggagtaattcttgttacacagaaaatgcctgcctccaggctttgaaaattaaattaaaaaggacacaattcgattgtggccgactgagactcaccagacaactgcgattcgatgataatgctcgtagaggacaccgactgcttttggtga | |||
| Mapping_target | C15F1 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (162) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01372984 | |||
| WBVar00172991 | |||||
| WBVar01307321 | |||||
| WBVar01240942 | |||||
| WBVar00551141 | |||||
| WBVar01438330 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006605 | |||
| Transcript | C15F1.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C15F1.3a.1:c.2750+245T>C | ||||
| Intron_number | 17/23 | ||||
| C15F1.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C15F1.3b.1:c.2750+245T>C | ||||
| Intron_number | 17/21 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
