WormBase Tree Display for Variation: WBVar00104125
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WBVar00104125 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00104125 | |||
Other_name | pas8984 | ||||
cewivar00048425 | |||||
Y51A2D.15a.1:c.2280-33A>T | |||||
Y51A2D.15c.1:c.1782-33A>T | |||||
Y51A2D.15b.1:c.2280-33A>T | |||||
HGVSg | CHROMOSOME_V:g.18607004A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y51A2D | |
Flanking_sequences | aaattgggcgtggcttgatagtgaatttgaaatttttaagaatttcggaaattttcaacaaaaaaaatgttttttttttttttgattaaaaaaaagaattttcttaaaattttggattttccgtcaaaaaaattttttcagaaaatttaaatttcccactgaaattttttcttagaaaatttgaacttttcgcctaccgctaaagtttttaaaaattgccaaaaatttcaagttttgctgcaaatttgtctatgtgaattctccgtgaaaattcaaattttgcggaaaaccaaaaaaaaa | actaacatccttaaaatttctcacattttcagacgttccgaatcagaatcgctaaacgaatccgacgatcgtgtccgtgagctcacccgagagaatatgcacaccaaggagcaagttttcatgctccaggagaagctccgcgagcttaatcttgagttgtcaactaaaaatgatgagattgacatggtgaaggcgtcaattgaggagttgaataggaattcggtaggttagaaaaaattgaacatttttgaaaaaaaaattttccaaatttttttttcaaatttcaaattccagaccgcc | |||
Mapping_target | Y51A2D | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (138) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01465435 | |||
Status | Live | ||||
Affects | Gene | WBGene00013082 | |||
Transcript | Y51A2D.15b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y51A2D.15b.1:c.2280-33A>T | ||||
Intron_number | 12/20 | ||||
Y51A2D.15a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51A2D.15a.1:c.2280-33A>T | ||||
Intron_number | 12/21 | ||||
Y51A2D.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y51A2D.15c.1:c.1782-33A>T | ||||
Intron_number | 7/15 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |