WormBase Tree Display for Variation: WBVar00103952
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| WBVar00103952 | Name | Public_name | WBVar00103952 | ||
|---|---|---|---|---|---|
| Other_name | pas8811 | ||||
| haw25547 | |||||
| cewivar00090665 | |||||
| H41C03.1.1:c.46-123C>T | |||||
| HGVSg | CHROMOSOME_II:g.5855117C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | H41C03 | |
| Flanking_sequences | agtgatctattgatatgctgtcaaatatgagagaatttttgattttgaccatctatttattttttggggaaatcatgggttatatgcattttatcaagcatggtatatgactataattggtgaaaaatgacaaactggttaaaagttttgaagatatgttcacaacaatttcgaagtagacatcattcaattggtttgatagccaaaatatgcttagattctaatatcgattttggccattctttcaatttttcaaatcgattgtatgagaaatgaaatataaaaaacctctaattcgtt | tatatttttaatcaaacatatcgtcactagaaaaatgggaagaatttaatagacttgtgatgttctttatgagaattcctatcaacttcgaatttacacaatagctgaatacattgtttcagtgcaaagatctcctcactgaatactacgataccgacttcaaccttctcagatgggcgcaaggatacggttttgataaagatgaggctctcgctgaacttcgtagacatcttcgctttcgtcagtactacgacctcgataatattttgacaaatgtaccagatcatccaattctcaaaa | |||
| Mapping_target | H41C03 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (139) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01437980 | |||
| WBVar01372103 | |||||
| WBVar00172297 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019268 | |||
| Transcript | H41C03.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H41C03.1.1:c.46-123C>T | ||||
| Intron_number | 2/8 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
