WormBase Tree Display for Variation: WBVar00103291
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WBVar00103291 | Name | Public_name | WBVar00103291 | ||
---|---|---|---|---|---|
Other_name | pas8150 | ||||
cewivar00118394 | |||||
C02C6.1b.1:c.392-63T>C | |||||
C02C6.1a.1:c.392-63T>C | |||||
HGVSg | CHROMOSOME_X:g.15569495T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C02C6 | |
Flanking_sequences | acttattttgcagcttattcaagatcgcaatgagtacgccgagttcctacacaagaagggtcatcgctttgtggattttgatgcagttcggaaagagattgaggatgagactgatcgtgtcactggacagaataagggaatcagtccacatccaatcaacttgcgtgtcttttctccaaatggtaagcatttagaaactcacagaaacgcaagtgcgctggatgatttgagcatctgaaaccagacttatgcaactttttttaaaatttaaattgcattaaagatttcataaatttacag | gagttgcacaaaatcactggaaaaattcacacattttaattaattcatacttaatttttcagttctaaatctgacactcatcgatttgcccggtctcacaaaagtgcccgtcggagatcaaccagcagatattgagcaacagatccgtgacatgattctcacattcatcaaccgtgagacttgcctcattcttgccgtcactccggccaacagcgatctcgccacttcggatgcgttgaaacttgcgaaggaagtcgatccacagggtcttcgcacgattggagtcctcaccaaacttga | |||
Mapping_target | C02C6 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (24) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001130 | |||
Transcript | C02C6.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C02C6.1b.1:c.392-63T>C | ||||
Intron_number | 2/7 | ||||
C02C6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C02C6.1a.1:c.392-63T>C | ||||
Intron_number | 2/9 | ||||
Method | WGS_Pasadena_Quinlan |