WormBase Tree Display for Variation: WBVar00101647
expand all nodes | collapse all nodes | view schema
| WBVar00101647 | Name | Public_name | WBVar00101647 | ||
|---|---|---|---|---|---|
| Other_name | pas6506 | ||||
| cewivar00026393 | |||||
| Y56A3A.2.1:c.230-16A>G | |||||
| HGVSg | CHROMOSOME_III:g.11857366T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y56A3A | |
| Flanking_sequences | cttcatagatctgaatctcccgaaccgtcttcgcaggtggtggtgccacggcggggctcaatgaagtcagaacatggtgcatcgatcgatactccattccacgataagcttgaacttttggtcgagccgttgtcatccattgtccgacatctttgattaataaatgtgacatgtagaatgtcattccgaagagacagatgatggaagcaatgacaccgcacgcgaaccacattcggatcacgaggattcggcatttcaggcgacgtgattcttcgaaaaatatatctgcaaaaaaaaatg | cacgtggtgtctcattttactgcaactttttcctcacgagagacgaggaaaagtggtttctaggccatggccgaggggccgacaagtttcagcggccttttatcttgctttgttttccgcttgttttctttcgtttttcacagccttttgccgttttttcttattaaaactgataaataaatattttttgcagatgctaaaacattttccaagtggaaaaattatgtattcagtgggcaagcagcggggaaagtggtcaatgcaatatgatggattacgggaatacaaaacctaaacttt | |||
| Mapping_target | Y56A3A | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (24) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013225 | |||
| Transcript | Y56A3A.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y56A3A.2.1:c.230-16A>G | ||||
| Intron_number | 3/9 | ||||
| Method | WGS_Pasadena_Quinlan |
