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WormBase Tree Display for Variation: WBVar00101332

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Name Class

WBVar00101332NamePublic_nameWBVar00101332
Other_namepas6191
cewivar00115708
F09A5.4c.1:c.210-5180G>A
F09A5.4e.1:c.131+680G>A
HGVSgCHROMOSOME_X:g.13160658C>T
Sequence_detailsSMapS_parentSequenceF09A5
Flanking_sequencesaaaaagaaataataaaaaatggaagaaaggcctgcctttgagacacaaccgataacattacttgattagaataatgcaattcgtaagaaaaattgtagctttgaatacaaattatatattcgcaatacgaagtagtagttatgggggggggggaaagatttatttattcgtcattctggaattttttaccaattgttgatcggttagcatttttagaaacaactagctttttattgtggcaatgttagttttgttttagttttggtacaaaaaagctctatgcaaaaatcaagagttttttttaaattttcatatggtcgtgcagtttctcttttcaacaatcttaaattatgtttaatttttatgaaaatcaaatcatcagttttcggtttaacccgctggaactacaaatagttgactctattaattttatgtcaatgagccagcattggctccggtcatttcttatttttgacagttcttgcgaacagtttttatttggcttttttgtactgcccctggtgtaatgtgaatgatttcactaattaaaaaaaattatagcctgactcatgatatttatccaattgtttggtgtcgccc
Mapping_targetF09A5
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008601
TranscriptF09A5.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4c.1:c.210-5180G>A
Intron_number3/7
F09A5.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09A5.4e.1:c.131+680G>A
Intron_number2/6
MethodWGS_Pasadena_Quinlan