WormBase Tree Display for Variation: WBVar00101098
expand all nodes | collapse all nodes | view schema
WBVar00101098 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00101098 | |||
Other_name | pas5957 | ||||
cewivar00074717 | |||||
Y53H1B.1.1:c.819+124A>G | |||||
HGVSg | CHROMOSOME_I:g.11295338T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y53H1B | |
Flanking_sequences | ctgttggacaaagttgctcggcgagaacgtcggttgaagccattgtcatttgagctggatgaagaacggaacgagcctgctggtccgcaacgtggtggctggagaaaaatcgatgaattattgattttttgtaaaatcccgaaaaatgtctgctgctggtgtatacatataacagccggcgtttcacgggtgattagcattaggtgtagaaaacccataaagtgtccgctgccaggaaacccgatatttaacaggactcagaactcggggatacttaaaacctggagtcggtcgctgatt | aaaattttaaaaaactgagtcgcagccgacaatttgctggcatagtcaattggtattcaacccgaattcaggtagcagccgatgtttcccgggtggcattctttctgaagattgctagctcaccgttttcccatcgcacattccctcggtattcatgcaggtgctcacagcacactggaagtacgtggagaccttgtcggcaaacttgaaggtgttcacttgagcatacgccacgttgttgtccttgttgtaggtcagatccgggaggatcagtggatcaatagcacaaccgtgctcgtc | |||
Mapping_target | Y53H1B | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (30) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01433055 | |||
Status | Live | ||||
Affects | Gene | WBGene00013180 | |||
Transcript | Y53H1B.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y53H1B.1.1:c.819+124A>G | ||||
Intron_number | 7/9 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |