WormBase Tree Display for Variation: WBVar00100892
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| WBVar00100892 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00100892 | |||
| Other_name | pas5751 | ||||
| cewivar00108782 | |||||
| CE01024:p.Gly76= | |||||
| F59B2.12.1:c.228A>G | |||||
| HGVSg | CHROMOSOME_III:g.9017897A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F59B2 | |
| Flanking_sequences | tcttacaggaatgatttctcctcaaggtgtcgctgtggcgacccttctgattcttggagtggttcatggatcccttattgatgacttgaaagcaaagtttagttcttcatcgagtggattcggagcttcaatgttttcaaattcaggaggttagtattgtcacaaaaaccatagctaattagcaatatctggctaaatatttttttcttcagcaaaatcctcatttggaggaggttttgcaatgccaaagttagacgctagtaaagctgcaatggttcattcaagtagttctcataaggg | catcatcaaagcagtggatcttcatcaaatacacattcactcactgttgttggtgctgatggaaagaatattactgagaattcagaaaagaaggacggttacaataaggaatcaaaggtcgatgaagccaatgagaacaccaaaatcaagagtgcagatggatctgtggtgagtataatagcaatttaagaactttaccagctatctcaattgtaaatcatcttggtatggcttccatgaatagcattaaaaagttttaaaaaatctaggcgagcgtccctcaaatgtttgtatgccaat | |||
| Mapping_target | F59B2 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (45) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447344 | |||
| WBVar01447345 | |||||
| WBVar01266860 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00010314 | |||
| Transcript | F59B2.12.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F59B2.12.1:c.228A>G | ||||
| HGVSp | CE01024:p.Gly76= | ||||
| cDNA_position | 234 | ||||
| CDS_position | 228 | ||||
| Protein_position | 76 | ||||
| Exon_number | 3/10 | ||||
| Codon_change | ggA/ggG | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
