WormBase Tree Display for Variation: WBVar00100382
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| WBVar00100382 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00100382 | |||
| Other_name | pas5241 | ||||
| cewivar00073971 | |||||
| ZC434.5.2:c.927A>G | |||||
| CE06580:p.Ser309= | |||||
| ZC434.5.1:c.927A>G | |||||
| HGVSg | CHROMOSOME_I:g.10337400A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | ZC434 | |
| Flanking_sequences | acacgctaaggcagcacttctcaatcaatactatcaacaagctttcgaagggcaactcatcatgcgattcgatgacacaaatccagccaaagagaatgctcatttcgaacatgttatcaaagaggacctctcaatgctcaacatcgttcctgatcgttggactcactcttctgatcattttgaaatgcttcttaccatgtgtgagaaattgttgaaggaaggaaaggcattcgtcgatgatactgacactgaaactatgcgtaatgaacgagaacagagacaagacagtcgtaatcgttc | aacactccagaaaagaatctccaattgtgggaagaaatgaaaaaaggttctccaaaaggattaacttgctgtgttcgtatgaagatcgacatgaaatcaaataatggagccatgagagatccaactatctaccgatgcaagccagaggagcatgtgagaacaggattaaagtacaaggtctatccaacttatgacttcacttgtccaattgtcgatagtgtagaaggtgtaactcatgctctcagaaccactgaataccatgatcgtgatgatcagtactacttcatctgcgatgctctc | |||
| Mapping_target | ZC434 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (22) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01422809 | |||
| WBVar01283816 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001337 | |||
| Transcript | ZC434.5.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | ZC434.5.1:c.927A>G | ||||
| HGVSp | CE06580:p.Ser309= | ||||
| cDNA_position | 945 | ||||
| CDS_position | 927 | ||||
| Protein_position | 309 | ||||
| Exon_number | 3/9 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| ZC434.5.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | ZC434.5.2:c.927A>G | ||||
| HGVSp | CE06580:p.Ser309= | ||||
| cDNA_position | 945 | ||||
| CDS_position | 927 | ||||
| Protein_position | 309 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
