WormBase Tree Display for Variation: WBVar00099947
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| WBVar00099947 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00099947 | |||
| Other_name | pas4806 | ||||
| cewivar00108027 | |||||
| C30A5.4:n.361-49T>A | |||||
| HGVSg | CHROMOSOME_III:g.8222756T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C30A5 | |
| Flanking_sequences | actgaaatcaaagcagcagttgagattcagaatcgattgacgaagaaaatggcgaaaaactctgagagaagaaaaaaaatggcacatggaccggagatgactgcacaaaaccgaacacaggagagaattgattttgttgagttcctcgatcgtcattatcaagtgatgcaagccggtgtaagtacggtaaaagtgggatttcaccttgaaatttgaatgttcttgcgcttagcaccgcccattttaaaatcaatcagcgaacttttggagggaatttaaataaactgaggagtttttagg | tttaggtttttgactgatctttttctttttcacgaattctttttccaggttcacaaaatgcactacacaaaggaggaatttgagaatgtgatctacgaggctcaaaccatcttctcatcggaaaaagctcttgttgacatcgatccaccatgtgtcgtagttggaaatcttcacggacaattcaacgatcttatcaacatgttcattctattgggacgtcctcctgagacagtttatgttttcactggtgattatgttgatcgaggaatgatgagtctgtataatgctcttattcaccta | |||
| Mapping_target | C30A5 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (47) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01447039 | |||
| WBVar01266142 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016239 | |||
| Pseudogene | C30A5.4 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C30A5.4:n.361-49T>A | ||||
| Intron_number | 2/4 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
