WormBase Tree Display for Variation: WBVar00099519
expand all nodes | collapse all nodes | view schema
| WBVar00099519 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00099519 | |||
| Other_name | pas4378 | ||||
| cewivar00106922 | |||||
| F57B9.3.1:c.258T>C | |||||
| CE50469:p.Leu86= | |||||
| HGVSg | CHROMOSOME_III:g.6940341T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F57B9 | |
| Flanking_sequences | ttagtcgtagcttcttgaagactatttggagttgaagcatctaaagttggcactatgtgtttcaaagttgcattatactgtgaggattttccttttttagggaaactatgatgaagtcgtcgaatctttcgacgacatggagctcaaggaggagcttcttcgcggaatctacggattcggtttcgaaaagccatctgccatccaaaagagcgcagttgctccatgcacaactggtaaagatgtcactattcagtctcaagctgggagcgggaaaactgtaatttctctaattgatattct | caaggaattgactgtgaagatgcacacttacaggtcattctattggctcctcaaagggggatggctcaacgagtaagaataatgaattttttattattctaatgccttatttttgtaatatctaggcgcatgagcaattgaaatctctgggcagaaatctgaatgtaaatgctacttgtttgggatttgatacaactgctgaaaacgacaaaataagtcatgtcttgatgggaactcccaaagattttcttagcaatatcccttccgatacatccagaattaagatgttcgttcttgacg | |||
| Mapping_target | F57B9 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (28) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01264888 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018997 | |||
| WBGene00305460 | |||||
| Transcript | F57B9.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F57B9.3.1:c.258T>C | ||||
| HGVSp | CE50469:p.Leu86= | ||||
| cDNA_position | 323 | ||||
| CDS_position | 258 | ||||
| Protein_position | 86 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | ctT/ctC | ||||
| Amino_acid_change | L | ||||
| F57B9.13 | |||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
