WormBase Tree Display for Variation: WBVar00099060
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WBVar00099060 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00099060 | |||
Other_name | pas3919 | ||||
cewivar00058145 | |||||
K08A8.2b.1:c.-13+1176A>C | |||||
K08A8.2a.2:c.-39+1176A>C | |||||
HGVSg | CHROMOSOME_X:g.7462307T>G | ||||
Sequence_details | SMap | S_parent | Sequence | K08A8 | |
Flanking_sequences | tatttcagtacaatacaaaaaatttaatttatttcttgttgtcaaggaaatcagggaaatagattttggaagtttattgtagatgaagcaaaaaaagcgagcatttctcgatggagcaaaaacctcgggacagcaagagagagcaagcaagcacacattggaaagcactctcacatacacatagctacagtatccgggagagaaaaaaacgacgaaggcttgtttcgctagttttgctgcttttgctggtcatgagaggaagaaaagagatggcacagagttttggttttggtttggttg | aaaaatactgggaagaaaacggagagagcgaagtaagcaggaagacgtgagaattcaaaaaacagtgttgacaggacgcttttttttaagtatcagaaataaaaaagaaatagagaaattttgattatcggtcatttttcaaagagttcccaatttcctattccaactttggcttatcaaaaatgcatcgtcaatattgtgagatgaatctataatcaatctagcttacgcctgaatgacggatatgggaaaatgatgagaagttgaaaagtgggacttcatattatttaatatatatga | |||
Mapping_target | K08A8 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (124) | |||||
Laboratory | QX | ||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01469739 | |||
Status | Live | ||||
Affects | Gene | WBGene00004949 | |||
Transcript | K08A8.2a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K08A8.2a.2:c.-39+1176A>C | ||||
Intron_number | 1/7 | ||||
K08A8.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K08A8.2b.1:c.-13+1176A>C | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |