WormBase Tree Display for Variation: WBVar00098544
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| WBVar00098544 | Name | Public_name | WBVar00098544 | ||
|---|---|---|---|---|---|
| Other_name | pas3403 | ||||
| Y97E10AR.2b.1:c.1844+77C>T | |||||
| Y97E10AR.2a.1:c.*73C>T | |||||
| HGVSg | CHROMOSOME_V:g.7999382C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y97E10AR | |
| Flanking_sequences | atgaccttttcgaaccagaagttaaaccaaaaatagatgaatggacgactcccgtacagtttaaagctgaagagcaagttgaacaaaatcaatcaaaagtgggttacaagaattgaaatttaaacaactgcagtgtttcagaagaagcccatctcgttctccagggtccagagttcagacgaagaagggaactctgtaaactttatgtcaacgaataatgttccgtaagttaatatgcaatcttgaaaagcatacacaacgaaatttgtcaattgactttttttggaaaatactcaaagt | atcagtgatattaattgtaaaagataataacttttaaaagatcgaaaaaattaacttgcaatttattttttaactcaaagtttatccaaaacctcgagaaaaataattgctcttctattcgtaagcgttcaaataatttcatatggggatcagttcgacgtagttctgtattgggatttgtctggaacaacgctatgagctcatttgatgttttttgtaaacacgatacaaactgtgttcgtggcggtaaacgaccaagtgtgaccaatggatttcccactattcttttggattccaata | |||
| Mapping_target | Y97E10AR | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00022397 | |||
| Transcript | Y97E10AR.2a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y97E10AR.2a.1:c.*73C>T | ||||
| cDNA_position | 2094 | ||||
| Exon_number | 10/11 | ||||
| Y97E10AR.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y97E10AR.2b.1:c.1844+77C>T | ||||
| Intron_number | 7/8 | ||||
| Method | WGS_Pasadena_Quinlan |
